Pyrexia of Unknown Origin (PUO) Pathway

Which kind of PUO, the first-stage workup, and what the clinical clues direct · v1

  • Enter the findings so far: the fever history, where the patient is being managed, and any clue already turned up.
  • You get the case sorted into one of the four Durack and Street categories, and the search pointed at whichever clues you have found.
  • It checks that the basic workup is finished before suggesting anything expensive.
  • Open it for fever above 38.3 C (101 F) persisting beyond three weeks, or beyond three days of investigation in hospital, without a diagnosis.

  • Children and adolescents under 18, in whom the differential shifts towards infection, juvenile idiopathic arthritis and malignancy, and the investigation order differs.
  • Fever of less than two weeks, which belongs in the acute undifferentiated febrile illness pathway.
  • The haemodynamically unstable patient, who belongs in a sepsis pathway whatever the duration of the fever.
  • Antimicrobial choice and dose, including the empirical cover that neutropenic fever needs within the hour.
  • The diagnosis. It narrows the search and names the category; tissue, culture or serology settles it.
Fever of less than 14 days is not PUO. Most prolonged fever in India settles or declares itself within a fortnight. Working it up as PUO that early means expensive tests with a low yield. Use the Acute Undifferentiated Febrile Illness Pathway for the first two weeks; it sequences tests by day of illness.

1. Patient and Fever Characteristics

2. Setting and Host

3. Potentially Diagnostic Clues

These turn an undirected search into a directed one. Tick only what you have actually found. Leaving everything blank is a legitimate answer and the tool will tell you what to do about it. Examine again in a week: the clue that decides the case is often absent at the first look.

Ask these again at every visit. Patients rarely volunteer them.

4. Investigations Already Completed

Nothing from the second stage is suggested until the first stage is complete. The commonest error in PUO practice is not a missed test, it is a CT ordered while the blood cultures are still pending. Tick only what has been done and reported.
Reading this table. The four groups below account for the great majority of classic PUO. The proportions differ between series and between countries, and they have shifted over time as imaging improved. What has not changed in Indian series is that infection remains the largest single group, and that tuberculosis, much of it extrapulmonary, is the commonest single infection.

1. Infection

CauseWhat should raise itTest that settles it
Tuberculosis, extrapulmonaryWeight loss, night sweats, lymphadenopathy, serosal effusion, normal chest filmTissue: node, pleura, peritoneum, marrow. Send for GeneXpert, culture and histopathology, not histopathology alone
Deep or occult abscessRecent surgery, diverticular or hepatobiliary disease, localised tendernessCECT abdomen and pelvis
Infective endocarditisMurmur, prosthetic valve, dental work, injecting drug use, embolic phenomenaThree sets of blood cultures then echocardiography, transoesophageal if suspicion persists
Enteric fever, relapsing or partially treatedPrior antibiotics, abdominal symptoms, relative bradycardiaBlood culture, bone marrow culture if already on antibiotics
BrucellosisLivestock contact, unpasteurised milk, sacroiliitis, undulant patternSerology plus prolonged blood culture, tell the laboratory it is suspected
MelioidosisDiabetes, soil or water exposure, coastal or paddy-field regions, abscesses in several organsCulture of blood, pus or sputum, tell the laboratory it is suspected
Visceral leishmaniasisEndemic area, marked splenomegaly, pancytopenia, hypergammaglobulinaemiarK39 rapid test, splenic or marrow aspirate
HIV and its opportunistic infectionsAny PUO, whether or not risk factors are volunteeredHIV test in every case, then CD4-directed workup
Osteomyelitis, including spinalFocal bone or spinal tenderness, prior bacteraemiaMRI of the region, then image-guided biopsy and culture

2. Malignancy

CauseWhat should raise itTest that settles it
LymphomaLymphadenopathy, night sweats, weight loss, raised LDH, cytopeniasExcision biopsy of a whole node. Fine needle aspiration is not adequate to classify lymphoma
Leukaemia and myelodysplasiaCytopenias, blasts on film, bone painBone marrow aspirate and biopsy
Renal cell carcinomaHaematuria, raised ESR, anaemia, flank massCECT abdomen
Hepatocellular carcinoma and liver metastasesCirrhosis, hepatomegaly, deranged liver profileTriple-phase CT or MRI liver
Atrial myxomaPositional symptoms, embolic events, raised ESR, murmur varying with postureEchocardiography

3. Non-Infectious Inflammatory Disease

CauseWhat should raise itTest that settles it
Adult-onset Still's diseaseQuotidian fever, evanescent salmon rash, arthritis, sore throat, very high ferritin, leucocytosisA diagnosis of exclusion. Yamaguchi criteria after malignancy and infection are excluded
Giant cell arteritisAge over 50, new headache, jaw claudication, scalp tenderness, visual symptoms, very high ESRTemporal artery ultrasound or biopsy. Do not delay treatment for the biopsy where vision is threatened
Systemic lupus erythematosusYoung woman, rash, serositis, cytopenias, renal involvementANA then specific antibodies and complement
Vasculitis, including TakayasuLimb claudication, pulse deficit, blood pressure difference between arms, bruitsCT or MR angiography of the aorta and branches
SarcoidosisHilar lymphadenopathy, uveitis, erythema nodosum, hypercalcaemiaTissue showing non-caseating granuloma, with tuberculosis excluded on culture
Haemophagocytic lymphohistiocytosisFever, cytopenias, very high ferritin, splenomegaly, high triglycerides, low fibrinogenHScore or HLH-2004 criteria, marrow showing haemophagocytosis

4. Miscellaneous and Undiagnosed

CauseWhat should raise itTest that settles it
Drug feverTemporal link to a new medicine, relative well-being despite high fever, eosinophilia, rashWithdrawal of the suspect medicine, with defervescence usually within 72 hours
ThyroiditisNeck tenderness, thyrotoxic symptoms, raised ESRThyroid function and, where needed, uptake scan. See the Thyrotoxicosis Diagnostic Pathway
Venous thromboembolismImmobility, malignancy, unilateral limb swelling, pleuritic painDoppler or CT pulmonary angiography. See the VTE Exclusion Pathway
Periodic fever syndromesOnset in childhood or early adult life, stereotyped attacks with well intervals, family historyClinical pattern, then genetic testing at a specialist centre
Factitious feverFever without tachycardia or a rise in acute phase markers, healthcare access, readings only when unobservedSimultaneous observed temperature and pulse. Approach the discussion with care and without accusation
No diagnosis reachedA substantial minority of PUO in every published seriesStructured observation with a defined review date is a legitimate plan, provided the patient is stable and improving
Evidence and Practice Points

1. What the Definition Is Actually For

The threshold exists to stop the expensive, low-yield investigation of a fever that would have declared itself if given a fortnight.

  • Petersdorf and Beeson, 1961: fever above 38.3 C, which is 101 F on the charts most Indian wards actually use, on several occasions, lasting more than three weeks, and undiagnosed after a week of investigation in hospital.
  • Durack and Street, 1991: the week in hospital replaced by three outpatient visits or three days of inpatient investigation, and the nosocomial, neutropenic and HIV-associated categories added.

2. Confirm the Fever Before Investigating It

A surprising proportion of referred PUO is not PUO: a normal circadian variation misread as fever, a reading taken only at home on an unreliable thermometer, or no documented fever at all. Before ordering imaging, ask for temperature charted by a health worker, four hourly, alongside the pulse.

  • A fever above 102 F (39 C) with a pulse under 90 raises relative bradycardia.
  • A fever with no rise in pulse and no rise in acute phase markers raises the possibility that the reading itself is not genuine.

3. Tuberculosis Is the First Thought in India, and Tissue Is What Settles It

Indian series consistently place infection as the largest group in classic PUO, and tuberculosis as the commonest single infection within it, much of it extrapulmonary and much of it with a normal chest radiograph. So the search is for a site to sample rather than for another blood test.

  • Lymph node, pleura, peritoneum, marrow and liver are all more informative than another round of serology.
  • Tissue goes for GeneXpert and mycobacterial culture as well as histopathology. Granuloma on histology alone does not distinguish tuberculosis from sarcoidosis, fungal infection or lymphoma.

4. The Clue-Driven Workup Outperforms the Checklist

Ordering every test in a long list is slower and less productive than following the clues that are present.

  • A murmur directs to blood cultures and echocardiography.
  • A large spleen directs to marrow, and to visceral leishmaniasis in an endemic area.
  • New headache in a patient over 50 with a very high ESR directs to the temporal artery.
  • Where there are no clues, repeat the history and examination rather than the tests. Clues appear over time, and the examination that was normal in week two is often abnormal in week four.

5. Sequence the Imaging, and Know What Each Test Is For

  • Ultrasound of the abdomen: cheap, available and reasonable first.
  • CECT of chest and abdomen: the workhorse of second-stage imaging, and it finds most occult abscesses, lymphadenopathy and solid tumours.
  • FDG PET-CT: useful where available and affordable, particularly for large vessel vasculitis and for identifying a site to biopsy. It is not available in most Indian district settings and a workup should not stall waiting for it.
  • Echocardiography: answers a specific question about the valves. Request it when there is a reason, not as a routine sweep.

6. Ferritin, and the Limits of a Single Number

A very high ferritin will be quoted in favour of adult-onset Still's disease and of haemophagocytic lymphohistiocytosis. It is also an acute phase reactant, and rises in infection, in malignancy and in liver disease, which makes it a reason to look harder at those rather than a reason to make either diagnosis. Still's disease remains a diagnosis of exclusion, and the exclusions that matter most are lymphoma and tuberculosis.

7. Empirical Therapy: What to Weigh

Each strategy has arguments on both sides, and what is common to all of them is that the decision should be deliberate rather than incidental.

  • Antibiotics may treat a culture-negative endocarditis, and also render subsequent cultures unhelpful.
  • Corticosteroids may produce a striking response in giant cell arteritis or Still's disease, and also a partial and temporary response in lymphoma, and can allow tuberculosis to disseminate.
  • A trial of antitubercular therapy is widely used in India, where the pretest probability of tuberculosis is high, and may be the only practical option when tissue cannot be obtained. Against that: both lymphoma and Still's disease can defervesce transiently on any of these agents, so a fall in temperature does not confirm the diagnosis, and a full course commits the patient to months of hepatotoxic treatment.
  • The naproxen test, a short course said to separate neoplastic fever, which settles, from infective fever, which does not, is a weak discriminator in modern series and should not be used to rule anything in or out. It appears here because it is still asked about in examinations and still occasionally used on the wards, not because it should decide management.

Record what is being treated, what response would count as a success, by what date it will be judged, and what will happen if the response does not come. Where tissue can still be obtained, obtaining it before starting is almost always the more informative order.

8. Not Reaching a Diagnosis Is a Recognised Outcome

In every published series a substantial minority of PUO is never diagnosed, and most of those patients do well. Once malignancy, tuberculosis, endocarditis and the treatable inflammatory diseases have been reasonably excluded in a patient who is stable and gaining weight, structured observation with a defined review date is a legitimate plan rather than a failure. Say so to the patient, because the alternative is an anxious search that continues indefinitely and does its own harm.

9. When This Pathway Is the Wrong One

  • Fever of less than two weeks belongs in the Acute Undifferentiated Febrile Illness Pathway, which sequences investigations by day of illness and is built for the tropical infections that dominate that window.
  • A haemodynamically unstable patient belongs in a sepsis pathway, whatever the duration of fever.
  • Neutropenic fever is a medical emergency in which the first antibiotic matters more than the diagnosis, and empirical cover should not wait for this tool.
Abbreviations: ANA (Antinuclear Antibody) · ANC (Absolute Neutrophil Count) · AOSD (Adult-Onset Still's Disease) · ART (Antiretroviral Therapy) · ATT (Anti-Tubercular Therapy) · CD4 (Cluster of Differentiation 4) · CECT (Contrast-Enhanced Computed Tomography) · CRP (C-Reactive Protein) · CT (Computed Tomography) · DMARD (Disease-Modifying Antirheumatic Drug) · ESR (Erythrocyte Sedimentation Rate) · FDG PET-CT (Fluorodeoxyglucose Positron Emission Tomography-Computed Tomography) · FUO (Fever of Unknown Origin, the same entity) · GCA (Giant Cell Arteritis) · HIV (Human Immunodeficiency Virus) · HLH (Haemophagocytic Lymphohistiocytosis) · IGRA (Interferon Gamma Release Assay) · IRIS (Immune Reconstitution Inflammatory Syndrome) · LDH (Lactate Dehydrogenase) · MR (Magnetic Resonance) · MRI (Magnetic Resonance Imaging) · NIID (Non-Infectious Inflammatory Disease) · NTEP (National Tuberculosis Elimination Programme) · OPD (Outpatient Department) · PDC (Potentially Diagnostic Clue) · PUO (Pyrexia of Unknown Origin) · TB (Tuberculosis) · TOE (Transoesophageal Echocardiography) · VTE (Venous Thromboembolism)
References
  1. Petersdorf RG, Beeson PB. Fever of unexplained origin: report on 100 cases. Medicine (Baltimore). 1961;40:1-30.
  2. Durack DT, Street AC. Fever of unknown origin: reexamined and redefined. Curr Clin Top Infect Dis. 1991;11:35-51.
  3. Mulders-Manders C, Simon A, Bleeker-Rovers C. Fever of unknown origin. Clin Med (Lond). 2015;15(3):280-284.
  4. Haidar G, Singh N. Fever of Unknown Origin. N Engl J Med. 2022;386(5):463-477.
  5. Bleeker-Rovers CP, Vos FJ, de Kleijn EMHA, et al. A prospective multicenter study on fever of unknown origin: the yield of a structured diagnostic protocol. Medicine (Baltimore). 2007;86(1):26-38.
  6. Kejariwal D, Sarkar N, Chakraborti SK, Agarwal V, Roy S. Pyrexia of unknown origin: a prospective study of 100 cases. J Postgrad Med. 2001;47(2):104-107.
  7. Pannu AK, Golla R, Kumari S, Suri V, Gupta P, Kumar R. Aetiology of pyrexia of unknown origin in north India. Trop Doct. 2021;51(1):34-40.
  8. Sharma BK, Kumari S, Varma SC, Sagar S, Singh S. Prolonged undiagnosed fever in northern India. Trop Geogr Med. 1992;44(1-2):32-36.
  9. Central TB Division, Ministry of Health and Family Welfare, Government of India. National Tuberculosis Elimination Programme: Training Modules and Technical and Operational Guidelines for TB Control in India. New Delhi: MoHFW.
  10. Fautrel B, Zing E, Golmard JL, et al. Proposal for a new set of classification criteria for adult-onset Still disease. Medicine (Baltimore). 2002;81(3):194-200.
  11. Fardet L, Galicier L, Lambotte O, et al. Development and validation of the HScore, a score for the diagnosis of reactive haemophagocytic syndrome. Arthritis Rheumatol. 2014;66(9):2613-2620.
  12. Li AY, Adams-Huet B, Cutrell JB, et al. Diagnostic yield of FDG PET-CT in fever of unknown origin. Clin Infect Dis. 2021;73(11):e4374-e4382.
How to Cite This Tool

DOIhttps://doi.org/10.5281/zenodo.22401630

AMA Style:Umakanth S. Pyrexia of Unknown Origin (PUO) Pathway. Version 1. MEDiscuss Clinical Decision Support System. Published 2026. Accessed . https://mediscuss.org/cdss/puo-pathway. doi:10.5281/zenodo.22401630

Vancouver Style:Umakanth S. Pyrexia of Unknown Origin (PUO) Pathway [Internet]. Version 1. MEDiscuss.org; 2026 [cited ]. Available from: https://mediscuss.org/cdss/puo-pathway. doi:10.5281/zenodo.22401630

Category Advanced DiagnosticsPathway
Specialties Internal Medicine, Infectious Diseases, Rheumatology

Written and maintained by

Dr Shashikiran Umakanth

Last revised 24 August 2026

How these tools are written and reviewed